methods, Reviews, Database

Fujinaka CM, Waas M, Gundry RL, Mass Spectrometry Based Identification of Extracellular Domains of Cell Surface N-Glycoproteins: Defining the Accessible Surfaceome for Immunophenotyping Stem Cells and their Derivatives in Methods in Molecular Biology: The Surfaceome, Eds Boheler KR and Gundry RL. Springer, Methods Mol Biol. 2018;1722:57-78. PubMed PMID: 29264798

Boheler KR, Gundry RL. Concise Review: Cell Surface N-Linked Glycoproteins as Potential Stem Cell Markers and Drug Targets. Stem Cells Transl Med. 2017 Jan;6(1):131-138. PubMed PMID: 28170199.

Bausch-Fluck D, Hofmann A, Bock T, Frei AP, Cerciello F, Jacobs A, Moest H, Omasits U, Gundry RL, Yoon C, Schiess R, Schmidt A, Mirkowska P, Härtlová A, Van Eyk JE, Bourquin JP; Aebersold R, Boheler KR, Zandstra P, Wollscheid B, A Mass Spectrometric-Derived Cell Surface Protein Atlas, PLoS One, 10(3): e021314, 2015. PMID: 25894527. PMC4404347.

Stem Cells & Derivatives

Mallanna SK, Waas M, Duncan SA, Gundry RL, N-glycoprotein surfaceome of human induced pluripotent stem cell derived hepatic endoderm. Proteomics, 2017 Mar;17(5) . PMID: 27966262.

Boheler KR, Bhattacharya S, Kropp EM, Chuppa S, Riordon DR, Bausch-Fluck D, Burridge PW, Wu JC, Wersto RP, Chan GC, Rao S, Wollscheid B, Gundry RL. A human pluripotent stem cell surface N-glycoproteome resource reveals markers, extracellular epitopes, and drug targets. Stem Cell Reports. 2014 Jun 6;3(1):185-203. PMC4110789.

Kropp EM, Bhattacharya S, Waas M, Chuppa SL, Hadjantonakis AK, Boheler KR, Gundry RL, N-glycoprotein surfaceomes of four developmentally distinct mouse cell types. Proteomics Clin Appl. 2014 8(7): 603-9. PMC4151168.

Gundry RL, Riordon DR, Tarasova Y, Chuppa S, Bhattacharya S, Juhasz O, Wiedemeier O, Milanovich S, Noto FK, Tchernyshyov I, Raginski K, Bausch-Fluck D, Tae HJ, Marshall S, Duncan SA, Wollscheid B, Wersto RP, Rao S, Van Eyk JE, Boheler KR. A cell surfaceome map for immunophenotyping and sorting pluripotent stem cells. Mol Cell Proteomics. 2012 11(8): 303-16. PMC3412963.

Cell Lines

Gundry RL, Raginski K, Tarasova Y, Tchernyshyov I,  Bausch-Fluck D, Elliott ST, Boheler KR, Van Eyk JE, Wollscheid B, The Mouse C2C12 Myoblast Cell Surface N-Linked Glycoproteome: Identification, Glycosite Occupancy, and Membrane Orientation, Molecular and Cellular Proteomics, 8(11), 2555–2569, 2009. PMID: 19656770. PMC2773721.

Primary Cells 

Mallanna SK, Cayo MA, Twaroski K, Gundry RL, Duncan SA. Mapping the Cell-Surface N-Glycoproteome of Human Hepatocytes Reveals Markers for Selecting a Homogeneous Population of iPSC-Derived Hepatocytes. Stem Cell Reports. 2016 Sep 13;7(3):543-56. PMCID: PMC5032032.



Haverland NA, Waas M, Ntai I, Keppel T, Gundry RL, Kelleher NL, Cell Surface Proteomics of N-Linked Glycoproteins for Typing Human Lymphocytes. Proteomics, 2017. PMID: 28834292